T-BAS version 2.4: Phylogenetic-data repository and tool for phylogeny-based placement

Carbone, Ignazio; White, J. B.

doi:10.52750/634503

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T-BAS v2.4

T-BAS: Tree-Based Alignment Selector Toolkit

Curate reference trees, place unknowns, and cite stable T-BAS accessions for reproducible research. Supports both single- and multi-locus phylogeny-based placement.

Submit Tree View Tree Guide

Workflow

Select reference tree

Preview trees and place unknown sequences.

Explore

Browse trees

Curated trees, alignments, and metadata organized by tree name and classification.

Upload

Create tree & place unknowns

Upload FASTA + metadata to build or extend a reference tree.

Data

Download datasets

Trees, alignments, and metadata available for local use.

Help

Documentation & help

Guides, examples, and best practices.

Local use

T-BAS with Docker

Run T-BAS on your own server or computer. Comes with trees, alignments, and placement pipeline.